Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs12374365 chr4:4464968 T/C 1.06E-9 288 26.28 24.02 13.53 KM Plot
KIRP rs12407812 chr1:89517074 C/T 3.69E-5 284 18.9 32.65 25.63 KM Plot
KIRP rs12418103 chr11:65607570 G/A 1.56E-5 275 25.53 32.17 8.92 KM Plot
KIRP rs12418781 chr11:65649484 G/T 5.08E-7 278 25.5 35.33 8.92 KM Plot
KIRP rs12418987 chr11:123517848 T/G 0.000162 278 25.6 29.38 2.07 KM Plot
KIRP rs12462375 chr19:33289811 A/G 3.68E-8 277 26.28 24.8 8.07 KM Plot
KIRP rs12488397 chr3:124603247 A/G 1.15E-5 285 26.07 24.67 16.4 KM Plot
KIRP rs12490725 chr3:124563573 C/T 0.000132 286 26.07 26.38 16.47 KM Plot
KIRP rs12491559 chr3:124594061 G/A 3.32E-5 285 26.07 26 16.53 KM Plot
KIRP rs12492781 chr3:154064360 A/G 0.000129 289 18.2 24.82 25.93 KM Plot
KIRP rs12493137 chr3:61708990 A/C 5.12E-6 289 19.53 25.6 26.77 KM Plot
KIRP rs12495703 chr3:124644588 G/C 0.000141 284 26.28 25.63 17.9 KM Plot
KIRP rs12496644 chr3:154049014 C/G 7.38E-5 288 26.07 24.82 18.2 KM Plot
KIRP rs12508329 chr4:5539935 T/A 4.69E-5 283 25.7 26.37 12.93 KM Plot
KIRP rs12529104 chr6:148651712 T/G 0.000106 284 26.4 17.47 18.2 KM Plot